Survival-associated eQTLs across different cancer types
We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
---|---|---|---|---|---|---|---|---|---|
KIRP | rs35072899 | chr6:28281541 | C/T | 2.33E-7 | 213 | 16.45 | 12.8 | 9.77 | KM Plot |
KIRP | rs35086750 | chr10:70651316 | T/A | 7.43E-9 | 214 | 14.87 | 18.77 | 9.77 | KM Plot |
KIRP | rs35086803 | chr5:79954075 | GC/G | 0.000112 | 211 | 18.65 | 14.97 | 9.77 | KM Plot |
KIRP | rs35091649 | chr11:8548183 | C/G | 0.000403 | 213 | 16.43 | 17.2 | 4.82 | KM Plot |
KIRP | rs35098436 | chr6:28134221 | T/C | 1.99E-7 | 213 | 16.43 | 16.43 | 9.77 | KM Plot |
KIRP | rs35120058 | chr6:27358166 | A/G | 1.25E-6 | 213 | 17.13 | 11.58 | 7.32 | KM Plot |
KIRP | rs35124495 | chr5:79899375 | GGCT/G | 5.06E-7 | 212 | 17.6 | 14.87 | 7.47 | KM Plot |
KIRP | rs35141973 | chr3:99992958 | A/C | 2.19E-5 | 214 | 16.43 | 19.3 | 3.85 | KM Plot |
KIRP | rs35142132 | chr10:63431218 | A/G | 0 | 210 | 18.03 | 6.2 | 1.17 | KM Plot |
KIRP | rs35178682 | chr16:20442805 | T/C | 0.000361 | 211 | 16.45 | 16.72 | 1.73 | KM Plot |
KIRP | rs351862 | chr5:176541370 | C/T | 6.99E-7 | 208 | 14.87 | 20.72 | 9.77 | KM Plot |
KIRP | rs351864 | chr5:176539286 | C/G | 1.06E-6 | 204 | 15.07 | 19.27 | 9.77 | KM Plot |
KIRP | rs35202442 | chr10:70686669 | CCT/C | 7.43E-9 | 214 | 14.87 | 18.77 | 9.77 | KM Plot |
KIRP | rs35209570 | chr16:74504985 | A/T | 0.000389 | 212 | 14.83 | 19.18 | 17.13 | KM Plot |
KIRP | rs35220431 | chr4:76565424 | T/A | 2.8E-5 | 211 | 14.68 | 17.2 | 14.73 | KM Plot |